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LOC_000P98W.1
Download
Download FASTA
Download metadata TSV
Display Name: China/LOC_000P98W.1/2024-11
Y. Y. Zhou,
X. J. Zhang,
J. Y. Lin,
Y. Zhu,
R. J. Lu,
W. J. Tan &
J. Shen
Sample details
Collection date
2024-11
Collection date (lower bound)
2024-11-01
Collection date (upper bound)
2024-11-30
Earliest release date
2024-12-21
Collection country
China
Collection subdivision level 1
Shanghai
Isolate name
SH2024-25087
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2025-12-15 16:10
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
Authors
Author affiliations
Children's Hospital of Fudan University, Infectious Disease Department
INSDC
NCBI release date
2024-12-21
NCBI update date
2024-12-21
INSDC accession
PQ766593.1
Host
Host taxon id
9606
Host name scientific
Homo sapiens
Submission details
Submission ID
PQ766593.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-12-15 16:10:37 UTC
Date released
2025-12-15 16:17:44 UTC
Genotype
Genotype
EV-D68
Nucleotide mutations
Mutations called relative to the
AY426531.1
reference
Substitutions
main
main:
A
2329
G
main:
A
2331
G
main:
A
2367
G
main:
A
2376
T
main:
T
2379
C
main:
T
2382
C
main:
A
2385
G
main:
A
2388
G
main:
T
2389
C
main:
C
2390
T
main:
A
2392
G
main:
C
2394
A
main:
C
2397
T
main:
G
2405
A
main:
A
2406
G
main:
T
2421
C
main:
G
2425
A
main:
G
2427
T
Show more
Deletions
main:2806-2808
Insertions
ins_main:3303:ATCCGG
Amino acid mutations
Mutations called relative to the
AY426531.1
reference
Substitutions
VP1
VP1:
S
1
L
VP1:
N
2
E
VP1:
G
6
E
VP1:
V
13
I
VP1:
T
46
S
VP1:
G
76
S
VP1:
K
84
R
VP1:
A
92
T
VP1:
S
95
G
VP1:
A
96
E
VP1:
G
97
R
VP1:
T
98
I
VP1:
H
99
D
VP1:
F
103
Y
VP1:
N
142
S
VP1:
D
144
N
VP1:
M
148
T
VP1:
K
168
E
Show more
VP3
VP3:
I
216
V
Deletions
VP1:140
Insertions
ins_VP1:306:RL
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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